We study computational and experimental RNA biology.

RNA regulation linking genetics and disease

The epitranscriptome and its regulation

Recent Publications


Chan, Tracey W; Dodson, Jack P; Arbet, Jaron; Boutros, Paul C; Xiao, Xinshu

Single-Cell Analysis in Lung Adenocarcinoma Implicates RNA Editing in Cancer Innate Immunity and Patient Prognosis Journal Article

In: Cancer Res, vol. 83, no. 3, pp. 374–385, 2023, ISSN: 1538-7445.

Abstract | Links | BibTeX

R, Zheng; M, Dunlap; J, Lyu; C, Gonzalez-Figueroa; G, Bobkov; SE, Harvey; TW, Chan; G, Quinones-Valdez; M, Choudhury; A, Vuong; RA, Flynn; HY, Chang; X, Xiao; C, Cheng

LINE-associated cryptic splicing induces dsRNA-mediated interferon response and tumor immunity Online

2023, visited: 24.02.2023.

Links | BibTeX

Choudhury, Mudra; Fu, Ting; Amoah, Kofi; Jun, Hyun-Ik; Chan, Tracey W; Park, Sungwoo; Walker, David W; Bahn, Jae Hoon; Xiao, Xinshu

Widespread RNA hypoediting in schizophrenia and its relevance to mitochondrial function Journal Article

In: Sci Adv, vol. 9, no. 14, pp. eade9997, 2023, ISSN: 2375-2548.

Abstract | Links | BibTeX

Khan, Arshad H; Bagley, Jared R; LaPierre, Nathan; Gonzalez-Figueroa, Carlos; Spencer, Tadeo C; Choudhury, Mudra; Xiao, Xinshu; Eskin, Eleazar; Jentsch, James D; Smith, Desmond J

Genetic pathways regulating the longitudinal acquisition of cocaine self-administration in a panel of inbred and recombinant inbred mice Journal Article

In: Cell Rep, vol. 42, no. 8, pp. 112856, 2023, ISSN: 2211-1247.

Abstract | Links | BibTeX

Liu, Zhiheng; Quinones-Valdez, Giovanni; Fu, Ting; Huang, Elaine; Choudhury, Mudra; Reese, Fairlie; Mortazavi, Ali; Xiao, Xinshu

L-GIREMI uncovers RNA editing sites in long-read RNA-seq Journal Article

In: Genome Biol, vol. 24, no. 1, pp. 171, 2023, ISSN: 1474-760X.

Abstract | Links | BibTeX

Recent News

March 1, 2024

Congratulations to Sari for advancing to PhD candidacy!

February 15, 2024

We welcome new postdoc Dr. Yuyun Zhang to our lab!

February 1, 2024

We welcome new postdoc Dr. Cong Liu to our lab!

January 10, 2024

Gio gives a presentation at Riboforum!

January 2, 2024

We welcome rotation students Natalia and Weijian to our lab!