We study computational and experimental RNA biology.

RNA regulation linking genetics and disease

The epitranscriptome and its regulation

Recent Publications


Chan, Tracey W; Dodson, Jack P; Arbet, Jaron; Boutros, Paul C; Xiao, Xinshu

Single-Cell Analysis in Lung Adenocarcinoma Implicates RNA Editing in Cancer Innate Immunity and Patient Prognosis Journal Article

In: Cancer Res, vol. 83, no. 3, pp. 374–385, 2023, ISSN: 1538-7445.

Abstract | Links | BibTeX

R, Zheng; M, Dunlap; J, Lyu; C, Gonzalez-Figueroa; G, Bobkov; SE, Harvey; TW, Chan; G, Quinones-Valdez; M, Choudhury; A, Vuong; RA, Flynn; HY, Chang; X, Xiao; C, Cheng

LINE-associated cryptic splicing induces dsRNA-mediated interferon response and tumor immunity Online

2023, visited: 24.02.2023.

Links | BibTeX

Choudhury, Mudra; Fu, Ting; Amoah, Kofi; Jun, Hyun-Ik; Chan, Tracey W; Park, Sungwoo; Walker, David W; Bahn, Jae Hoon; Xiao, Xinshu

Widespread RNA hypoediting in schizophrenia and its relevance to mitochondrial function Journal Article

In: Sci Adv, vol. 9, no. 14, pp. eade9997, 2023, ISSN: 2375-2548.

Abstract | Links | BibTeX

R, Yamamoto; Z, Liu; M, Choudhury; X, Xiao

dsRID: Editing-free in silico identification of dsRNA region using long-read RNA-seq data Online

2023, visited: 05.06.2023.

Links | BibTeX

Khan, Arshad H; Bagley, Jared R; LaPierre, Nathan; Gonzalez-Figueroa, Carlos; Spencer, Tadeo C; Choudhury, Mudra; Xiao, Xinshu; Eskin, Eleazar; Jentsch, James D; Smith, Desmond J

Genetic pathways regulating the longitudinal acquisition of cocaine self-administration in a panel of inbred and recombinant inbred mice Journal Article

In: Cell Rep, vol. 42, no. 8, pp. 112856, 2023, ISSN: 2211-1247.

Abstract | Links | BibTeX

Recent News

September 24, 2023

We welcome Tadeo Spencer as a Bioinformatics MS student!

September 15, 2023

Congratulations to Anna for winning the best WQE award at the MBI retreat!

September 14, 2023

Congratulations to Sari for presenting her first poster for PhD at the MBI retreat last week!

September 10, 2023

Our lab enjoyed a productive, relaxing and fun retreat, with great food!

September 1, 2023

We welcome visiting student Siqi Wang to our lab!